PCI: Kill off set_irq_flags() usage

set_irq_flags is ARM-specific with custom flags which have genirq
equivalents.  Convert drivers to use the genirq interfaces directly, so we
can kill off set_irq_flags.  The translation of flags is as follows:

  IRQF_VALID -> !IRQ_NOREQUEST
  IRQF_PROBE -> !IRQ_NOPROBE
  IRQF_NOAUTOEN -> IRQ_NOAUTOEN

For IRQs managed by an irqdomain, the irqdomain core code handles clearing
and setting IRQ_NOREQUEST already, so there is no need to do this in .map()
functions, and we can simply remove the set_irq_flags calls.  Some users
also modify IRQ_NOPROBE, and this has been maintained although it is not
clear that is really needed.  There appears to be a great deal of blind
copy and paste of this code.

Signed-off-by: Rob Herring <robh@kernel.org>
Signed-off-by: Bjorn Helgaas <bhelgaas@google.com>
Acked-by: Jingoo Han <jingoohan1@gmail.com>
CC: Kishon Vijay Abraham I <kishon@ti.com>
CC: Murali Karicheri <m-karicheri2@ti.com>
CC: Thierry Reding <thierry.reding@gmail.com>
CC: Stephen Warren <swarren@wwwdotorg.org>
CC: Alexandre Courbot <gnurou@gmail.com>
CC: Jingoo Han <jingoohan1@gmail.com>
CC: Pratyush Anand <pratyush.anand@gmail.com>
CC: Simon Horman <horms@verge.net.au>
CC: Michal Simek <michal.simek@xilinx.com>
CC: "Sören Brinkmann" <soren.brinkmann@xilinx.com>